EcotoxicoMic Newsletter #11 (June 2020)

The 11th EcotoxicoMic Newsletter is available.

EcotoxicoMic NewsLetter 11 – June 2020

Don’t wait to register to the EcotoxicoMic2020 conference (and the Dromics training course if interested) to benefit from the early registration fee (until July 17th) and from the 50% discount for your next publication in ‘Frontiers in Microbiology (Research Topic on Microbial Ecotoxicology).

Newsletter EcotoxicoMic June_2020

UDIKOVIC-KOLIC Nikolina (Rudjer Boskovic Institute, Zagreb, CROATIA)

First Name: Nikolina

Name: Udikovic-Kolic

Position: Senior Research Associate and Head of the Lab for Environmental Microbiology and Biotechnology

Email: nudikov@irb.hr

Institute / University / Company: Rudjer Boskovic Institute

Research Unit: Department for Marine and Environmental Research

Address (city, state): Bijenicka 54, Zagreb

Country: Croatia

Please give 5 key-words showing your research / interest in Microbial Ecotoxicology:

  • antibiotics
  • pesticides
  • soil
  • river
  • microbial

Main kinds of contaminant(s) of interest:

  • antibiotics
  • pesticides
  • heavy metals

Main kinds of microorganisms of interest:

  • bacteria

Main kinds of ecosystems of interest:

  • river
  • soil

Do you give courses on Microbial Ecotoxicology ?: NO

Most relevant articles in the field of Microbial Ecotoxicology (max.5):

1) Bielen Ana, Šimatović Ana, Kosić-Vukšić Josipa, Senta Ivan, Ahel Marijan, Babić Sanja, Jurina Tamara, González Plaza Juan José, Milaković Milena, Udiković-Kolić Nikolina* (2017) Negative environmental impacts of antibiotic- contaminated effluents from pharmaceutical industries. Water Research. 126, 79-87.
2) Milaković Milena, Vestergaard Gisle, Gonzalez Plaza Juan Jose, Petrić Ines, Šimatović Ana, Senta Ivan, Kublik Susanne, Schloter Michael, Smalla Kornelia, Udiković-Kolić Nikolina* (2019) Pollution from azithromycin-manufacturing promotes macrolide-resistance gene propagation and induces spatial and seasonal bacterial community shifts in receiving river sediments. Environment International. 123, 501-511
3) Karpouzas Dimitrios, Papadopoulou Evangelia, Ipsilantis Ioannis, Friedel Irene, Petrić Ines, Udiković-Kolić Nikolina, Djurić Simonida, Kandeler Ellen, Menkissoglu-Spiroudi Urania, Martin-Laurent Fabrice (2014) Effects of nicosulfuron on the abundance and diversity of arbuscular mycorrhizal fungi used as indicators of pesticide soil microbial toxicity. Ecological Indicators. 39, 44-53.
4) Karpouzas Dimitrios, Kandeler Ellen, Bru David, Friedel Irene, Auer Y Kramer, Susanne Vasileiadis, Petrić Ines, Udiković-Kolić Nikolina, Djurić Simonida, Martin-Laurent Fabrice (2014) A tiered assessment approach based on standardized methods to estimate the impact of nicosulfuron on the abundance and function of the soil microbial community. Soil Biology & Biochemistry. 75, 282-291.
5) Udiković-Kolić Nikolina*, Devers-Lamrani Marion, Petrić Ines, Hršak Dubravka, Martin-Laurent Fabrice (2011) Evidence for taxonomic and functional drift of an atrazine-degrading culture in response to high atrazine input.Applied Microbiology and Biotechnology. 90(4)
1547-1554.

VASQUEZ CHRISTODOULOU Marlen Ines (Cyprus University of Technology, CYPRUS)

marlen.vasquez

First Name: Marlen Ines

Name: Vasquez Christodoulou

Position: Special Teaching Staff and Research Group Leader

Email: marlen.vasquez@cut.ac.cy

Institute / University / Company: Cyprus University of Technology

Research Unit: Oikotoxicologia Research Group

Address (city, state): 30 Archibishop Kyprianos str

Country: Cyprus

Please give 5 key-words showing your research / interest in Microbial Ecotoxicolgy:

  • multi-stressor effects
  • contaminants of emerging concern
  • molecular bioassessment
  • microbial bioindicators

Main kinds of contaminant(s) of interest:

  • contaminants of emerging concern
  • mixture toxicity

Main kinds of microorganisms of interest:

  • microbial ecology including bacteria
  • diatoms
  • fungi and archaea

Main kinds of ecosystems of interest:

  • freshwater and coastal
  • intermittent rivers

Do you give courses on Microbial Ecotoxicology ?: NO

Most relevant articles in the field of Microbial Ecotoxicology (max.5):

RIVERO ARZE Andrea (INERIS, Verneuil-en-Halatte, FRANCE)

Andrea RIVERO

First Name: Andrea

Name: RIVERO ARZE

Position: PhD student

Email: Andrea.RIVERO-ARZE@ineris.fr

Institute / University / Company: INERIS

Research Unit: Unité Expertise et Essais en Ecotoxicologie (EXES)

Address (city, state): Rue Jacques Taffanel, 60550 Verneuil-en-Halatte

Country: France

Please give 5 key-words showing your research / interest in Microbial Ecotoxicolgy:

  • microalgae
  • nanomaterials
  • flow cytometry
  • nano-bio interaction
  • attachment

Main kinds of contaminant(s) of interest: nanomaterials

Main kinds of microorganisms of interest: microalgae

Main kinds of ecosystems of interest: Freshwater and marine

Do you give courses on Microbial Ecotoxicology ?: NO

Most relevant articles in the field of Microbial Ecotoxicology (max.5): in preparation

EcotoxicoMic Newsletter #10 (April 2020)

The 10th EcotoxicoMic Newsletter is available.

EcotoxicoMic NewsLetter 10 – April 2020

It includes, among others, informations about the 2nd EcotoxicoMic International Conference.

The abstract submission deadline and the deadline to apply to the free registration grant have been extended to April 26th. Please note this is the Final Extended Deadline. Submitting an abstract does not entail any obligation to register for the conference. Please don’t hesitate to send your abstract even if you are not sure to participate

Please respect the barrier gestures to stop the viral pandemic and take care of your health.

EcotoxicoMic Newsletter April 2020

GHIGLIONE Jean-François (CNRS, FRANCE)

Ghiglione

First Name: Jean-François

Name: Ghiglione

Position: Research director

Email: ghiglione@obs-banyuls.fr

Institute / University / Company: CNRS

Research Unit: Laboratoire d’Océanographie Microbienne UMR 7621

Address (city, state): 1 Aveneue Fabre – 66650 Banyuls sur mer

Country: France

Please give 5 key-words showing your research / interest in Microbial Ecotoxicolgy: -plastic pollution
-marine bacteria
-biodegradation
-OMICs
-toxicity

Main kinds of contaminant(s) of interest: plastics: polymers and additives

Main kinds of microorganisms of interest: bacteria

Main kinds of ecosystems of interest: marine

Do you give courses on Microbial Ecotoxicology ?: NO

Most relevant articles in the field of Microbial Ecotoxicology (max.5):

-Jacquin J, Cheng J, Odobel C, Pandin C, Conan P, Pujo-Pay M, Barbe V, Meistertzheim AL, Ghiglione JF. Microbial ecotoxicology of marine plastic debris: a review on colonization and biodegradation by the ‘plastisphere’ Frontiers in microbiology (IF 4.52) 10:865.
-Lambert S, Tragin M, Lozano JC, Ghiglione JF, Vaulot D, Bouget FY, Galand P. (2019) Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations.ISME Journal (IF 9.52) 13(2):388-401.
-Planes S, Allemand D, Agostini S, Banaigs B, Boissin E, Boss E, Bourdin G, Bowler C, Douville E, Forcioli D, Furla P, Galand P, Ghiglione JF et al. (2019). The Tara Pacific expedition: a pan-ecosystemic approach of the “-omics” complexity of coral reef holobionts across the Pacific Ocean. Plos Biology (IF 8.38), 17(9):e3000483.
-Dussud C, Meistertzheim AL, Conan P, Pujo-Pay M, George M, Fabre P, Coudane J, Higgs P, Elineau A, Pedrotti ML, Gorsky G, Ghiglione JF (2018) Evidence of niche partitioning among bacteria living on plastics, organic particles and surrounding seawaters. Environmental Pollution (IF 5.09) 236: 807-816.
-Chapron L, Peru E, Engler A, Ghiglione JF, Meistertzheim AL, Pruski AM, Purser A, Vétion G, Galand PE, Lartaud F (2018) Macro-and microplastics affect cold-water corals growth, feeding and behaviour. Scientific reports (IF 4.61) 8:15299.

BRIAND Jean-François (University of Toulon, FRANCE)

BRIAND

First Name: Jean-François

Name: Briand

Position: Associate-professor

Email: briand@univ-tln.fr

Institute / University / Company: University of Toulon

Research Unit: MAPIEM

Address (city, state): CS 60584 83041 TOULON CEDEX 9

Country: France

Please give 5 key-words showing your research / interest in Microbial Ecotoxicology:

  • marine biofilm
  • community structure
  • environmental drivers
  • artificial surfaces
  • multiomics

Main kinds of contaminant(s) of interest:

  • Metals

Main kinds of microorganisms of interest:

  • prokaryotes
  • diatoms

Main kinds of ecosystems of interest:

  • marine

Do you give courses on Microbial Ecotoxicology ?: YES

If yes, please tell us more about the courses (University, course level,website,etc): University of Toulon, Master of marine sciences (IPA) / http://master-sdm.univ-tln.fr/master-sdm-parcours-ipa/

Most relevant articles in the field of Microbial Ecotoxicology (max.5):

Catao E., Pollet T., Misson B., Garnier C., Ghiglione J.-F., Barry-Martinet R., Maintenay M., Bressy C. & Briand J.-F. (2019). Shear stress as a major driver of marine biofilm communities. Front. Microbiol 10:1768

Coclet C., Garnier C., Durrieu G., Omanović D., D’onofrio S., Le Poupon C., Mullot J.-U., Briand J.-F. & Misson B. (2019). Changes in bacterioplankton communities resulting from direct and indirect interactions with trace metal gradients in an urbanized marine coastal area. Front. Microbiol. 10:257

Briand J.-F., Pochon X., Wood S.A., Bressy C., Garnier C., Réhel K., Urvois F., Culioli G. & Zaiko A. (2018). Metabarcoding and metabolomics offer complementarity in deciphering marine eukaryotic biofouling community shifts. Biofouling 34:657-672

Briand J.-F., Barani A., Garnier C., Réhel K., Urvois F., Le Poupon C., Bouchez A., Debroas D. & Bressy C. (2017). Spatio-temporal variations of marine biofilm communities colonizing artificial substrata including antifouling coatings in contrasted coastal environments. Microb. Ecol. 74:585-598

Camps M., Barani A., Gregory G., Bouchez A., Le Berre B., Bressy C., Blache Y. & Briand J.-F. (2014). Antifouling coatings influence both abundance and community structure of their colonizing biofilms: a case study in the North-Western Mediterranean Sea. Appl. Environ. Microbiol. 80:4821-4831

EcotoxicoMic Newsletter #9 (March 2020)

The 9th Newsletter is specifically dedicated to the 2nd EcotoxicoMic International Conference that will be organized in Montpellier (France) from the 6 to 9 October 2020. 

Considering the severe COVID-19 outbreak, the deadlines for the submission and the registration to the conference might be delayed. However, when possible, we encourage you to submit your abstracts in early April to allow us to start the review process.

Please respect the barrier gestures to stop the viral pandemic and take care of your health.

EcotoxicoMic NewsLetter 9 – March 2020

NL9

SURESH KUMAR RS (Arba Minch University, ETHIOPIA)

Suresh_photo

First Name:  R.S.

Name: Suresh kumar

Position: Assistant Professor in toxicology

Email: suresh874u@gmail.com

Institute / University / Company: Arba Minch University

Research Unit: Environment Toxicology

Address (city, state): Arba Minch University, post box no- 21, Arba Minch, SNNPR

Country: Ethiopia

Please give 5 key-words showing your research / interest in Microbial Ecotoxicolgy:

  • Bio accumulation
  • Microbial degradation
  • Rhizoremediation
  • Aquatic ecotoxicology
  • Microbial forensics

Main kinds of contaminant(s) of interest:

  • Pesticides
  • Heavy metals
  • Nanoparticles

Main kinds of microorganisms of interest:

  • Rhizobacteria
  • Pseudomonas sps

Main kinds of ecosystems of interest:

  • Aquatic ecosystem
  • Paddy field ecosystem

Do you give courses on Microbial Ecotoxicology ?: NO

Most relevant articles in the field of Microbial Ecotoxicology (max.5):

BONNOT Kévin (INRAE/ADEME, FRANCE)

Bonnot

First Name: Kévin

Name: Bonnot

Position: PhD Student

Email: bonnotkv@gmail.com

Institute / University / Company: INRAE / ADEME

Research Unit: ECOSYS Grignon / LBE Narbonne

Address (city, state): 1 Avenue lucien brétignières

Country: France

Please give 5 key-words showing your research / interest in Microbial Ecotoxicology:

  • Biotransformation
  • PPCP
  • QSAR
  • Pharmaceuticals
  • Ecotoxicology

Main kinds of contaminant(s) of interest:

Pharmaceuticals and personnal care products

Main kinds of microorganisms of interest:

  • Bacterial strains
  • Fungi
  • Micro-algae

Main kinds of ecosystems of interest:

  • Aquatic
  • Solid waste
  • Soils
  • Artificial media

Do you give courses on Microbial Ecotoxicology ?: NO

Most relevant articles in the field of Microbial Ecotoxicology (max.5):

Not yet